YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7494685
Protein type:	Globular with Signal Peptide
Type Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFFLHETMCF LLRFSSFSRL FLNSEFLRQK MTATSNSAPL AGGSLSSSAT AQPPQPPPGH  60
   61 QQQHPLPQIY DSQMQYYYGS SMPNQPIPTY TAQNGAPQQF GTPPYYQDAN GQFGQVPAQQ 120
  121 QMMTAGHPYF YMAQPQQGGQ HVAQSGQPQI FYYQQPLGQM AQQAAPMYFH PMQAASTPML 180
  181 SEQMSMMPQI QSTNPQQSEQ LRKSGAQIST TRTVPLTSST PLPTSREYET VQRDRNRNSQ 240
  241 SRYQCPIEHD DLPIDEISKI TIDNHNDDTM SAEKENRFNK NRVEKLGRRG FAKPEVDSQL 300
  301 PHNFKTRLCM THAAGINPCA LGARCKFAHG LKELRASDIP TRYPNNKYKT KLCKNFARGG 360
  361 SGVCPYGLRC EFVHPSDTEF QNIPPYQRKM VEEHDSIPED YVVARYQPRF MHTSGKATTP 420
  421 TKVTLKQRNV AGSMMCLSNT GRDLEAGGDF NHPEINENDL PPHLRRIRRG NPPVTRSRPS 480
  481 FSTKWTSVEN LGLRGHY

Type	Start	End	Confidence
Signal Peptide	1	51	0.61
N-region	1	42
H-region	43	48
C-region	49	51
Cleavage Site	51	52
Non-Cytoplasmic	52	497	0.99