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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE15463
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.86
Topology Confidence: 0.17
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKTLLFILI FFNIPIIAIE EIPDIKENGE KSSYTQFDNG AKLEVNKEHK RVIKIGHIGA  60
   61 VGVMPNDARI LNISKENLIE EGLVGDDIEF EIVSRQACSE SFEGVAVAAE LYHVHQVRAF 120
  121 IGPYCAAELE AVTKMATFWN IPIISYSSVP NAVSDRSVYK TLARVSSKNT NSIAEATVAL 180
  181 LLHYKWLKVA IATNTGSTAF ERVSIFEEIM HREGVTIVKK VMFDENTDAN EMMNSGQLGD 240
  241 LAANARIIIC LFSSTKELSK EFMQATYTMR MNNAEYAYII PWLQSGTKDL TPWIGADGEM 300
  301 LQRVKDHYAN AIIVDDVNGF DDSVVSSFVE KIEKHGMQKS DIDTNINGYL HLFDSLKLYA 360
  361 LAIRKVLNET DNEAYVTNGQ FIWNRMRRMK FEGVVSRSSS EENKDAGAIG TVLMDDVADR 420
  421 APIFSAFYIS PNRDKVMKMV NMESELISNC DGLKNKSGCF QLKINDIKSG FWPSEDGSMP 480
  481 LDEPICGYRG QRCSYLLEIS VGSLIILLIL ISVVFFFLFR YCENKQLEKM PWRIFHDDLQ 540
  541 FIDEEQVKSM MSVGSVTTKL SNIQTGQKQH AIIGVNTHTT YHRYKQRRPI KFIKEDMQLL 600
  601 TQMKQAVHDN LNPFLGAAFN EKEEMLVLWK FCSRGTIQDI IYNANVVLDE KFHGAFVRDI 660
  661 TLGLEYLHAS PIGYHGSLTP WCCLIDRNWM VKLSDYGIAN PLERWEKQGA IEIAAAKDSD 720
  721 DKSQASQATS IIYMAPELLK NRETNKRRGM DQSWVKQSML RRQAGDIYSF GMVMYEILFR 780
  781 SLPFRDNTNI SELVDYLADG SKTVSPEIQN QMGLHPDLNA LLRDCWSENP EIRPSIRRVR 840
  841 LNTEMVLKTK GSLVDQMMKM MEQYANNLEK LVAERTGMLE EANIRADQLL TQLLPAYVAN 900
  901 ELKMGRSVAP KLYSSATILF SDIVGFTTIC SGSTPLEVVN MLNGLYTGFD ECITRNKSYK 960
  961 VETIGDAYMV VSGIPEENEY NHSRNIANTA LDMRQYLTGY QIPHRPTHRV RCRWGFHTGS1020
 1021 VAAGVVGLTC PRYCLFGDTV NVSSRMESTG TPGMIQMSEE AHMHIRAHHP VFTTTERGEV1080
 1081 QVKGKGTCRT FWLEDRVGDA STTNYIQNVE GV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle