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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE15411
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYLFLVLMIS NTFQLQKCHQ MGKNSLKRAL ELDVVDFAEH TSAHGIPRAY VSTGWRRYMW  60
   61 LLCFLFCLSC FGHQAYLIVE RFNRNDIIVG VEIKFEEIKF PAVTICNMNP YKNSAARELG 120
  121 AIRNAIEAFE LAIDKSDGNA HSKRKKRSAN SKMVPIDLLC KEEHGMFTAH DYGHVECVSR 180
  181 VFPMPTNQRQ AKHFTDWSTC VTFEDMSKVG DTDDDEIFWN CHQRKDWTHK ICHLAEGSNQ 240
  241 LKTCKCFEDT CVSDEVTKQL VWPLQLSKNG TKLCISPESS GPRYCASAQK FQVSTCSNCD 300
  301 WLGKCEESDD MDLEEEIDSK TCICHHGNCF QIKGNVKKRK RRTPERKVHE RLLSRYEGLL 360
  361 AVYSHCNCTK QHGCVSTSVP DMDLENSNKT CLCFYNKKNE QIWPCYKEPE WEERKCSRLS 420
  421 IFHRGVKDRI ALRAKAMENM IFAVDALTEE EKWKISYNKS DFIMKCSFNG RECNVKHDFV 480
  481 EYLDPTYGAC FTYGQKLGNN TNERSGPAYG LRLEVFVNVT EYLPTTEAAG VRLTVHATDE 540
  541 QPFPDTLGFS APTGFVSSFG IKLKSMVRLP APYGDCVREG KTEDFIYTQK AYNTEGCQRS 600
  601 CIQKHLSKTC GCGDPRFPPY RESKNCPVDD PYKRECIKNE MHVATRDSKK LGCSCKQPCN 660
  661 QDVYSVSYSA SRWPAIAGDL SGCPLGMAAH HCLNYKREQG SMIEVYFEQL NYESLLESEA 720
  721 YGWSNLLSDF GGQLGLWMGV SVITIGEVAC FFFEVFISLI SSNRTKRRPA RKSFSSSLRC 780
  781 STDYNLNKDG FNLDN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle