YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE15359
Protein type:	Transmembrane
Type Confidence:	0.76
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEREALLHTS SFPKNSESSF PTKSISKSLL IIFALSNIAF FICFSKIKFS IGGSEIVRPE  60
   61 VIVSVPTETS TTTSTSLSST SQFISSTNAP ALRSPENKIF PQNSTNCPYE EWNQVRTDFI 120
  121 PNTDLHKQWS KKWKSNFKYL YHTLPSVAAA FLHEDQIVVT LTAENQADEI VYCRYYDCRR 180
  181 REIMDHFEST IFPRGTVYCA RRPGAKFITV SKTLKKILEY SVPIVSRLGK PQHYFTVCMA 240
  241 PLYGDEPKFL QIVDFIEYHK LQGATFFHIY LRNVSDYDRV LLDNYAKTGD IELITLQDHF 300
  301 WRADYMWHNG QINDCHHRNR YFSKWTALID IDERLEMKSD KFKIVADYLD SIQDDSIANL 360
  361 HFRVKWVMKH HDTPAKYENE TQLKREMLFH KYQNLSQLGA IWDQPKCIIR PENVAIMTIH 420
  421 GPREMYKGEK MTVVPENVGF IRHYRNVELR IFHKAFERMM SHAPFNISPI DKDIDQDLSK 480
  481 KIMDRVKWIY EIVQPTCEQK AKMYRVESTS PSCNNETKTL N

Type	Start	End	Confidence
Cytoplasmic	1	27	0.67
Transmembrane Helix	28	44	0.72
Non-Cytoplasmic	45	521	0.97