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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ptr-23
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDGSIARPRR QSLLIGQRSL DVYNEVDQGP RFVRWIIGKF RKWGFLIAKH AWLAILICLI  60
   61 ISTLAIVKIL LTKQANDITG YTPYGARAKD EYLEYQKFFS SSGLPIAAYL YIVAKDEGSM 120
  121 SRPDYLDETI QVLNFALNNI TMYDSISGKS ETFNQFCQSF CQINEPVRQF YNGYQILSDG 180
  181 EQNSRIKIQY PVSDMFGRQF SLQPNFFGVE LFDQPDDAAK LLDSADGDPV IELNATKLVD 240
  241 PVSRITNVKS VKMITLQFRA EHKPGWTEAQ VKKWEMSLVD IFEKRYNSKR LKIYAYSQSY 300
  301 VEEEMVRGGI IMIPYLVVGF AIMCLCSCVL VMIRALYMHQ ENGYKIILAI MACLTPLLAC 360
  361 ATALALMFLC GVRFASILCV IPFLVLSIGV DSSYLMIHEW QRVTKHMRET PRKKDSVGHR 420
  421 MSEVMAEVGP AILISCLTNM FADAVGSFTS SPEITLLCTG NMLSMWFAFI YQMTFYAGLM 480
  481 SIVGGYEFGS DEIDKNRMEI NIAENRVNIA RHHRPLTRQP SKFHEATQPI ISDSLQKYTH 540
  541 LMTTPLVFVS VCLVYIAYLA FSVYGITQLN INLTAQKLFA LDSPLLELDD LRIKYQVPVY 600
  601 SMATVFVNTP GKLENPARLK RLNEFVREME SINGTWGEGW GELGTKYFVR DYDVFQQSFG 660
  661 SEDEDDEDFM DDDKPVTVHS DDKMTYREDE LKYFLKWPEY DFWQGFVKLR NATNSTDPEA 720
  721 EELDRFFFTT GYHGDNLTIW TQRGEMLRAW RQVVDKYPDF GASVFHEDGV YLDLIDNMPT 780
  781 DTWQSILGTL VCMAMVCFVF LNNWFTVAIA SLSVLSICAG ILGFLSWWKV DLDPITMAAM 840
  841 IISIGFSVDI PAHVSYHYYQ ASIQEGPMSP PSSRLANCLS SVAFPALQAA LSTILCVCSL 900
  901 LFVNLYMAEV FVKTMVLCVV LCNLHGLVFL PAILILLDSI RWACRPKGAA AQRPKQPKTN 960
  961 SRQKQKNDKV QPEKSVVTDR PEI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle