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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gcy-14
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.58
Topology Confidence: 0.17
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCLFLLLFPY LASGQFLQTV KVGLLFSKDT ASVMRAVGYR TSAAAVLVAR DRIRAEHLLD  60
   61 QYDFNFTVKF DECTEGLAGG KTVELINHDN VDVIIGPTCN RAGIAVASLA AYYNVPVFQW 120
  121 GLTTAADIGN VSRYPTTVTL SLDTHSMALG VREVLRRFEW DEFVFIYSND GDEEKCASMK 180
  181 DDLEKMGIEN SDVTLAYMVQ IQTVTLDALQ KALTEVSKRG RIIIACFANG RGFKKAFVAS 240
  241 TVLAGMSTDE YMYMFAEPQS RGFYVDEING GEHYSWDDTD GNFVTGLTPE QIRDAYGKVL 300
  301 YICDNMGLPT TITPEFANFS SQLISRMTEQ PFNCVQDCSN STYKVPATYA GQLFDAFYAY 360
  361 GVALNRSLTQ DPTRANLKNG SFVLSDIGMS FQGVGGGTVT LDDTGTRIVQ VYMFALNTSL 420
  421 LPYLAASLVI NGSEVEYTPF YKSEADLWSV RPLARPICGF SGLECPPDFV KEYLVYTIIA 480
  481 AVIVVLALLA GCAGLLYTMQ QKISLKMDNF KILIMVKNTN FLKVEERKYT YAYGIAMAKS 540
  541 RKLKSQVFPF SITLLLNFRM KRKEMERQDL LWQVPFIELQ QVQSKSKAEA SMHSFASGPS 600
  601 TSTKITVESR SETINFIFYY YQQDILAAMK HDLILQFDAE QKAEFRQMRN FDNDNLNKFI 660
  661 GLCLDGPQLF SLWRFCSRGS LSDVISKSSM QMDSFFMFSL IRDISNGLLF IHNSFLKCHG 720
  721 HLTSRCCLID DRWQIKISGY GLKSVRTFEN PKKEDLLWTP PENLRNENEE RLPEGDIYSF 780
  781 GIICSEILTR SSAFDLENRK EKPDVIIYQV KKGGHNPMRP SLDTGETVEI NPALLHLIRD 840
  841 CWTERPSERP SIEQVRGHLN GMRDGRKSNL MDHVFNMLET YASTLEEEVS DRTKELVEEK 900
  901 KKSDVLLYRM LPKMVADKLK LGQTVEPETF EQVTIFFSDV VQFTTLAGKC TPLQVVTLLN 960
  961 DLYTIFDGII EQNDVYKVET IGDGYLCVSG LPHRNGNEHI RHIARMSLGF LSSLEFFRVQ1020
 1021 HLPSERINLR IGINCGSVVA GVVGLTMPRY CLFGDAVNTA SRMESNGKPG KIHVTAEANQ1080
 1081 MLTQVVGGFR TESRGEVIIK GKGVMETYWL LGEQSRISVS AQAPREKTPE PPRRQSVRSI1140
 1141 SPIIEKMSEE TQKGLYSAYK DFNNGNECVS 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle