YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE15120
Protein type:	Transmembrane
Type Confidence:	0.71
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNNIIKLNV GGKEFSTTEA TLTKFEGYFK QKLKTRGKIW QTTLFIDRSP THFEIILNFM  60
   61 RDGKVDLPET LKELMPIFRE TEYYTLASLV EQCGGAIASL GGGPEFDKFR GIIPTEAVVS 120
  121 INNSDVDNNQ VEVGNYYVNY IRAATYDRFM KWKNSSKTEQ YAEQEDTPST MFWKIVLILC 180
  181 IYILCEYLVQ KFRPQKSRQQ KLFI

Type	Start	End	Confidence
Non-Cytoplasmic	1	169	0.86
Transmembrane Helix	170	189	0.67
Cytoplasmic	190	204	0.57