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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: glr-5
Protein type: Transmembrane
Type Confidence: 0.76
Topology Confidence: 0.21
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQFNNNYIFS IFTILHVFST SCIAYKIGAI FREREDAHIE AAVRYSVEWL SQRGIYGDID  60
   61 LVIEYIDVLD HYDAIKKACK MLEKDHIVAL LGGSHAALNA QLERITDDLD IPFLTAIDDL 120
  121 RTDMGKSKID FWPRPQLFEA VVDMFTHWRW NRIVLVYEGD ERIRRLEQLL ESEEYASIRF 180
  181 YLIKVHDGDY MKAARQVKEL EECRLLHKKD CSEFSRLLVD MNPEHTYTFL LASLQMGLIE 240
  241 LKHWFLLTNM ELSTMDMELF RYNHARFISP YPVDSTFLTE NRDAFNFSHF KEHITEKWAM 300
  301 KTDNSRNLKM MEAVFTFDAV YAFANVFNEL SSHMQMNDVP QTLCRKSSRN SRKYQHGRSL 360
  361 IDNIVHNDLH GLSGDLRRLN GHPLKSNFSM RIQLLGYSGR LDDIGFWEPA TNVHVNMSGD 420
  421 SKAQLQRNVQ VSDELKPHFR VTTIMERPYV MLKKNHYELD ANSKFEGFCI DLLAELSKDL 480
  481 GFTYTIHAVK DGKYGNDKYG NGSWDGMMGE ILRGEAEMAV APLTVNYRRS EAVDFTKPFL 540
  541 SLGISILYKV PDDQQPDLFS FLNPLSWQIW TAIATSIITV TLGMYFVANV TPYEWNLNFS 600
  601 CCTAHEPHPA AAFATNQEAP IVMSNNYSFW NTVWYVLSTM LKGGCDFGPR AVSTRLLGGT 660
  661 WWVFYLVIIS AYTANLAAVL TVSRPYIPIK NLDDLANQTT ISYGTIRGGS TMQFFQESRI 720
  721 AAHVKMWQYM KDKDVFVTSN GKGVERALSM NYAYLMESTS LEYETQQNCN LTQIGGVLGS 780
  781 KGYGIALAKK SEWTDRISRQ ILLYAKRGII EMKKTKWWRS KGAACASTAS AVKHDRFALS 840
  841 MYNVAGLFIT LGVGIVLAAI VVIFELIHRC HHIAKKEGKP FLEELLYELR FALNMNSLSD 900
  901 HRSRQKMSTC NSNGNGKPNH LNENGHLKKT TI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle