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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: unc-52
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRSSTVLAA LLALLLVATN DAARHRKYRQ TYQDIDSDDD DTSDVQITVF PSEKEVRDGR  60
   61 DVSFECRART SDNSVYPTVR WARVGGPLPS SAHDSGGRLT INPVQLSDAG TYICVSDYNG 120
  121 NTVEARATLS VVSYGPQEVS NGLRQAGQCM ADEKACGNNE CVKNDYVCDG EPDCRDRSDE 180
  181 ANCPAISRTC EPNEFKCNNN KCVQKMWLCD GDDDCGDNSD ELNCNAKPSS SDCKPTEFQC 240
  241 HDRRQCVPSS FHCDGTNDCH DGSDEVGCVQ PTVVDPPQTN LQVPRGTTFS LTCKAVAVPE 300
  301 PYINWRLNWG PVCEPPRCLQ TSEGGYGTLT IHDAQPVDQG AYTCEAINVK GRVLATPDCI 360
  361 VRVVDDPRPQ PPQPPTAPPQ RASCDTRGAV TPYPNNYGTC ECKSQVTGPN CDQCKPGAFH 420
  421 LSEKSPEGCL KCFCFGVSND CRSSGHYRTK DRLMFAGDAE GVTISDIEER TIDRNTPFSF 480
  481 FKTGYLTFDG TTDGVAKYWR LPQRFLGDKV TAYGGKMEFE IEFSGSGHHS SEPMVVLKGN 540
  541 QNILVHRVRN QEHVLRSDSP VRITVETYET NYEQLNGAAA TREDLLMVLA DLDAFLIRAT 600
  601 HVAHQTSTSL GDVSWEIAVD RYTPDGLALE VEQCVCPPGY LGTSCEDCAP GYERSGYGPY 660
  661 LGTCVPIQPR HQQCGPGAVA PTAPAQGQCQ CKASVIGPNC DRCAPNSFGL APTNPQGCIP 720
  721 CFCSGVTQQC SASSYRRTSV SIDYARGDRD QLELTTSDSR QPYSPQTRAE LSGQAIEFRS 780
  781 FEEARGQTLY WKLPEKFLGD KVTSYGGTLE YTFKFSGNGN SDQSADVILR GNDIALQYKH 840
  841 REPFYADREN KVQIKIIETS WQRVDGQQAT REHLLMTLAD LDTLLIKSTY NDDCTDSQLL 900
  901 SANLEFAEPY GQGLTAAEVE QCICPPGYVG TSCEDCAPGY SRTGGGLYLG LCEKCECNGH 960
  961 ASQCDKEYGY CLDCQHNTEG DQCERCKPGF VGDARRGTPN DCQPEATRAP CHCNNHSPRG1020
 1021 CDSFGRCLLC EHNTEGTHCE RCKKGYYGDA TKGSPYDCTP CPCPGASDCY LDNEGQVACR1080
 1081 ICPAGLQGRL CNECAPGYTR SNKPAGRVCE PIGQVTNEDI TFVQKPHEVL RVRIMEPKRQ1140
 1141 IALPGDRVHW ICQVTGYTTE KIHVEWTKVG EMSLPPNAKA YDGYLVLKGV EAENAGQYRC1200
 1201 TATTITQYAT DDALLTISKR ISGRPPQPVI DPPHLVVNEG EPAAFRCWVP GIPDCQITWH1260
 1261 REQLGGPLPH GVYQTGNALK IPQSQLHHAG RYICSAANQY GTGQSPPAVL EVKKPVIPPK1320
 1321 VDPIRQTVDR DQPARFKCWV PGNSNVQLRW SRPGGAPLPS GVQEQQGILH IPRASDQEVG1380
 1381 QYVCTATDPS DNTPLQSEPV QLNIRDPAPP QRGAAPQIDP PNQTVNVNDP AQFRCWVPGQ1440
 1441 PRAQLKWSRK DGRPLPNGIL ERDGFLRIDK SQLHDAGEYE CTSTEPDGST QLSPPARLNV1500
 1501 NQPQAIQPQV DPPVQTVNEG EPSRIRCWVP GHPNIQLQFV KRGRRPLPAH ARFSQGNLEI1560
 1561 PRTLKSDEDE YICIATDPTT NRPVESNPAR VIVKSPIRPI IDPAEQTVPE GSPFKIRCYV1620
 1621 PGHPSVQLTF RRVSGQLNED ADENNGLLAV QRAELTDEGD YICTARDPDT GAPIDSTPAT1680
 1681 VHVTNAAAPP QVEAHQEPPT AVVEPRTWNG KPGERHQFRC ITTGSPTPKI TWTGPNGSPL1740
 1741 PHDVTPLEPN ILDFSNGRSE LNGDYTCTAS NPIGEASDHG NVNIGPSLTV KTNPPGPKLI1800
 1801 VTVGEPLQVK CEAFGAPGDP EPEVEWLHDP GPERGDLPDD FKPVTISEQF IRHPNVGLGN1860
 1861 AGVYTCKGSS AHATATKNIY IEVVEPSRIA TVSILGGSSQ WFDQGEKGEL ICTATGSSLV1920
 1921 DRLEWEKVDD QLPTDVEEHN EPGLLHFPSF KNSYAGEYRC NGYRNNEIIA SAAVHVHSSA1980
 1981 NADDEPKVEI EPPRVRVVSQ GDNIVLKCSV QGAENGEHFK WALLRGGSLV RQLGTEPTLE2040
 2041 ITKADPSNDF GVYRCNVEDN NGLVIGSAFT AVSVGQQDKS HAQIVKFDDK SDASFTCPIY2100
 2101 SVPGSKVDWT YENGDLPSKA VPNGNKIEIK EFDDASAGTY VCKVSFDGNV VEGFVTAQMF2160
 2161 VPDTIIQVLL EVSSESPQIG DRAWFDCKVT GDPSAVISWT KEGNDDLPPN AQVTGGRLLF2220
 2221 TDLKEDNAGV YRCVAKTKAG PLQTRTVLNV GSGKRKRKHL GNRRGRRLRH RRRNAQNGPL2280
 2281 SRKTRTTTKL FGSWF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle