YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE14786
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.77
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRHKASLHLL IVTSSFSDDL ELVDWPNGRD IERSDGLLAT ILVESNAKCF LIWHDRFPTD  60
   61 PQALFQFSEN ESFDDFIEFL KDKKRAQLLT SHSENLIGSP HLSVTSLASA LFLLLCYCVD 120
  121 QYYFLRTIFK MLLDYLLLLI ITAFLIIAVI KIKLKVSYFL IIYKKISMIL LQKKPFHLRK 180
  181 LSHVAFRNVI NSMDIINKV

Type	Start	End	Confidence
Signal Peptide	1	17	0.77
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	96	0.81
Transmembrane Helix	97	119	0.77
Cytoplasmic	120	130	0.57
Transmembrane Helix	131	152	0.89
Non-Cytoplasmic	153	199	0.69