YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE14392
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLRLSSISG KAKLPDKEIC SSVSRILAPL LVPWKRRLET LAVMGFIFMW VILPIMDLWV  60
   61 PFHVLFNTRW WFLVPLYAVW FYYDFDTPKK ASRRWNWARR HVAWKYFASY FPLRLIKTAD 120
  121 LPADRNYIIG SHPHGMFSVG GFTAMSTNAT GFEDKFPGIK SHIMTLNGQF YFPFRREFGI 180
  181 MLGGIEVSKE SLEYTLTKCG KGRACAIVIG GASEALEAHP NKNTLTLINR RGFCKYALKF 240
  241 GADLVPMYNF GENDLYEQYE NPKGSRLREV QEKIKDMFGL CPPLLRGRSL FNQYLIGLLP 300
  301 FRKPVTTVMG RPIRVTQTDE PTVEQIDELH AKYCDALYNL FEEYKHLHSI PPDTHLIFQ

Type	Start	End	Confidence
Cytoplasmic	1	39	0.96
Transmembrane Helix	40	60	0.90
Non-Cytoplasmic	61	67	0.71
Transmembrane Helix	68	85	0.74
Cytoplasmic	86	359	0.69