YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE14351
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.32
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRYAKRIFNF ILKNNKFYIV IIVVLLLIVI FQWMVPGYYD YNQISTLVYC DKNPSDQHRY  60
   61 LLFPMVTIVF DGGLGNQLFE VFSLLGLALK LNRTAIFNSE DWILHSKLNL LREQVPQVAE 120
  121 RVISIPIEIP ESSRFIYSPA CCHFQFSPLL SCEQSKYLVI DGHYFQSHKY FSSIETSIRK 180
  181 WLNPPQEEEK LLKKMIRRKD EFRFKICVHI RRGDFLTDSQ HAGTASNFTI RAVDHLYTQH 240
  241 PGLVYLFSND PGWVREKIAA HLDYQSDVKV METSEAIKDL YFAQIHCDAV LITAPSSTFG 300
  301 WWLGYLSKNQ SSQTPNGGRG FLPVHVEEIG DVTKRADNFK IKLNFIFFSN KNCFKKNLNE 360
  361 SSENNLKLCK AELSIFHFKK N

Type	Start	End	Confidence
Cytoplasmic	1	16	0.93
Transmembrane Helix	17	35	0.97
Non-Cytoplasmic	36	67	0.91
Transmembrane Helix	68	89	0.60
Cytoplasmic	90	286	0.71
Transmembrane Helix	287	305	0.32
Non-Cytoplasmic	306	381	0.60