YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE14339
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	31	0.97
Transmembrane Helix	32	52	0.91
Non-Cytoplasmic	53	68	0.90
Transmembrane Helix	69	91	0.92
Cytoplasmic	92	99	0.86
Transmembrane Helix	100	119	0.94
Non-Cytoplasmic	120	128	0.77
Transmembrane Helix	129	151	0.90
Cytoplasmic	152	162	0.92
Transmembrane Helix	163	185	0.88
Non-Cytoplasmic	186	202	0.75
Transmembrane Helix	203	224	0.95
Cytoplasmic	225	243	0.95
Transmembrane Helix	244	267	0.86
Non-Cytoplasmic	268	288	0.91
Transmembrane Helix	289	311	0.92
Cytoplasmic	312	323	0.86
Transmembrane Helix	324	343	0.94
Non-Cytoplasmic	344	377	0.95
Transmembrane Helix	378	398	0.90
Cytoplasmic	399	417	0.85
Transmembrane Helix	418	439	0.94
Non-Cytoplasmic	440	446	0.82
Transmembrane Helix	447	466	0.97
Cytoplasmic	467	485	0.93

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDSVGPSVD KKKEAEMSAG RILNEKQTDW KSMWICIFLQ FIVGVQISVY YMSMWPYLSG  60
   61 LDKTADVDFL GWIVAACSIG CTISNPIYGF WNQKTMSVKW PAITGFLIAA VGQVWYGLLT 120
  121 VATNVKWLML FARFFTGLGV GNIAALRVYA ATASTPKDRM RAISFGTGGF VLGISFGPVI 180
  181 SAVFTPLGAY GISIGPIVFN MFTVVAYLMA LICFLSCVVI YFLFEESYAG IVTKEEKAND 240
  241 DLVVPMFDIP SAIICIYLFM IVNIIATNVE VMSTPLTTVL YDWKDSDSIL YNGITLALSC 300
  301 IISVIFHVLL GASRIGKIDK RNQMLIGIFV FLLYQAFMYP WGFYSGPLNF LPPGVETTEV 360
  361 GGCLVEYHWC QETTRVPLSV YLFCFIVFFG VAFPFVETPS AALYSEVLGP RKQGTMQGFF 420
  421 SLGGSIAPVI ASISSTAIFK YTGYRYVIVL QSVFLLVGAA LILIFYKRLV PLKVIKKSED 480
  481 EKISN