YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE14337
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	20	0.95
Transmembrane Helix	21	42	0.93
Non-Cytoplasmic	43	72	0.97
Transmembrane Helix	73	95	0.92
Cytoplasmic	96	103	0.85
Transmembrane Helix	104	123	0.94
Non-Cytoplasmic	124	132	0.75
Transmembrane Helix	133	154	0.91
Cytoplasmic	155	165	0.91
Transmembrane Helix	166	188	0.91
Non-Cytoplasmic	189	206	0.86
Transmembrane Helix	207	228	0.96
Cytoplasmic	229	247	0.98
Transmembrane Helix	248	271	0.85
Non-Cytoplasmic	272	292	0.91
Transmembrane Helix	293	313	0.94
Cytoplasmic	314	327	0.87
Transmembrane Helix	328	347	0.93
Non-Cytoplasmic	348	381	0.95
Transmembrane Helix	382	400	0.97
Cytoplasmic	401	421	0.84
Transmembrane Helix	422	443	0.94
Non-Cytoplasmic	444	450	0.84
Transmembrane Helix	451	470	0.97
Cytoplasmic	471	490	0.93

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQIILSEKI EAEKRTDWRS MWIAIVMQFV VGVQISVYYM SMWPYLSGVS FIDNMESKKF  60
   61 QTFQLDKTAD FDFLGWVVAS CSIGCTIANP IYGYWNQKTM SVKWPVITGF LIAAVGQLWY 120
  121 ALLGFFGNVK WFMLCARFLT GLGVGNIAAL RVYAAMASTP KDRMRAISFG TGGFVLGFSF 180
  181 GPVISSIFTP LGEEGIQFGG FILNMYTIVS YLMVLICLSA CLVVYLFFKE SYAGIVTKEE 240
  241 KEKDEVEVPM FDIPASLICI YLFMIVNMTA TNIEVMSSPL TTVLYDWKDS DSIFYNGIAL 300
  301 AISSAISVAF NIAQGSTRIG RIDKRKQMLF GLTFFLLYQL FMYPWGFYSG PLNFLPKGVE 360
  361 TKVAGGCYSE YLWCNDTTRV PLFIYLFCFI VFFGVAFPFV ETPAPALFSE ILGPRKQGTM 420
  421 QGFFSFGGSL APVIASISST AIFKYSGYRY VIVLQASTLL VAIVLILIFY KRLVPLKVVK 480
  481 KCKDSSSSMS