YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE14227
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSTKAYVLA LAGCTNSGKS TLAKEFQRFF GAGETTIINQ DEFYKTENEV EKIYHPDAEH  60
   61 LTDEGYYWSF DEKEAINIDQ FRQRILNESK VYKNVIIDGN MITEMDEIVD LCDRIVVMTL 120
  121 DFKTCKRRRE ARTDYVPADT PGYFVNVAFP AYVRHLERAR QRSRTDSRLT FIDVSESKFD 180
  181 DKNKSIVNFR QQILDDHIKL TDEVIDVKVV DQLVSHPSCG AISTFNGVTR DNHGGRDVSN 240
  241 LSYDCHDLMA YKKLRGICAE IRAEYPDVKK IAIFHRLGKV DIGESSVIIS TSSPHRKTAI 300
  301 QATEKCIDLL KEHAPIFKYE EYSNGEVDGV WKSNIEDSKQ

Type	Start	End	Confidence
Signal Peptide	1	23	0.91
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	340	0.99