YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE13982
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDYLTFLAWV IIAAFFYLLT LLALKFKTIR LLILLLAFLP IAIMLAFFIF RIPQLINETH  60
   61 KTQFFDTWKI GGHRGSAHDN IPENSLEAFS AVKSEGGQLA EMDIQITMDG VPVICHDSNT 120
  121 VRVTGVDKEI SAMNITEFRK LRFIGTNVSL PTFEEAVAHC VANNIMMIWD VKNVDENLLK 180
  181 QFVIQIRTYN LYSKVLVSGF NPIDTYLVKM ADPKILTGFT WRSWELSTTD EAATTPRFTG 240
  241 TLHAVASVLD VLAFGLARSL IIPKFLGSDV IFYHVSDISR FLKTDAAANN IYLAGWTSNN 300
  301 QYEQVWLRDY LKVPFLTDNV GTVPH

Type	Start	End	Confidence
Non-Cytoplasmic	1	5	0.85
Transmembrane Helix	6	24	0.95
Cytoplasmic	25	30	0.83
Transmembrane Helix	31	50	0.95
Non-Cytoplasmic	51	325	0.94