YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE13888
Protein type: Transmembrane
Type Confidence: 0.66
Topology Confidence: 0.35
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEMSTKAISM KAPNTEQSKD VVVREVLPGN GITTGGSREG SKESANPPGT PPPPEEKPKE  60
   61 PMVDVPVVQI TPEIKGCQFY HGIIPRVDAE LSLRYVGDYL LRRAEPRENA GGQFLIISVK 120
  121 REAGFVHVPI SQDKEGAKQF YFMPTLKENT VLDLIDVHLA RAQPVCVQWN VYLRKPVLRA 180
  181 TWIIPHEDVI LYRKIGSGAF GEVFLARMVD PTSEYVLDCA VKKLKQADSQ TLTNFNILNF 240
  241 LVIVFWGCSR YFDVHFSISS ITMKSHFHTT KKSFASMNRA DIFFYFEVSA TEATMDAKLR 300
  301 FMKEARMMLK NYKHKHIVMI FGIATLNSPL LILMELCPNG SLISYLRKNK GKVTLLEKLR 360
  361 FSAEASSGLA YLEKMECIHR DIAARNCLLS AKNEIKISDL GLADDKGMVI DYSLDKLPIK 420
  421 WLAPEIMQDK VYSLKSDIWA FGIMIWEIFA EGDEPYPGLN NTQARAKIVV LDYRMKFPDE 480
  481 APTELVQVID TCWKKDPDMR QTMVLHSSAL QLLYENKLPL LFAQTIQATS LPPGTIAQSS 540
  541 TPIPIPISGV SGAPAVVTAN GVEQFTPPSD NVEKSSYQM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle