YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE13696
Protein type:	Transmembrane
Type Confidence:	0.76
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSIHPYWFK ICCLVFIIFL FFFQKAKFER SSCFCKSRKS GKTYDFCYEN PRNPESIGAK  60
   61 FNCNLLDTLE ELGLISETER IPSLSSIIND ESAVVFVSST SDDHLHLSLK SYNSIREFYP 120
  121 HHKYILHGLN LSAAYIDKLP RNDENFEFRA FNTSTYPKFV SNWMTYNFKP LLMAQMLKEF 180
  181 PAVWWIDAHI GVVKPNIIGN LYEEIKTERL SDDYASVIAE SLAPHSNFAV LNPKLLKFFP 240
  241 TSSLELLKQR TQVQAGLIFL ARTRYTMKLF KWMVLCALTE DCMNPPGSQS ICIFLHDWNK 300
  301 YYADCFRYDQ SIINLLLVND FTGIHKYYSE KLSSSFVKVI ILNIILNIFT FRSARHYSGS 360
  361 PRREKVDEAG NESPESKHYM KVVQLLGSRG SKKARKKSTD PYAALQS

Type	Start	End	Confidence
Cytoplasmic	1	6	0.66
Transmembrane Helix	7	24	0.73
Non-Cytoplasmic	25	407	0.91