YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE13680
Protein type:	Globular with Signal Peptide
Type Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNLKFSWIM AIFTIFFVFT ITRKAGNSEV KVVDYIVPFV NYSKMLLTAP ENQLISCLIP  60
   61 KSMSQLTVNI MCLLYEKQEY FKNDYSLNDT WTSQRNCLEE FKFIHPLEPI QKGTVKFAFI 120
  121 RDPLKRFVSF YLDKCVREKH CYDCGTNMRC VVEKVYTNLK KIQNSWHGTS ELGYVEQHAA 180
  181 PMSWNCNFHK DIESWELIPI GSDANERTIA IERLSGLLKK QGVNQTLIEK VQEGRKSGET 240
  241 EHSTHASNAR FEAERIIQKD PYIQNLIYFF DYLVFPFTKD FKIPFTTTQY HRINHFETLY 300
  301 GS

Type	Start	End	Confidence
Signal Peptide	1	25	0.73
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	302	0.92