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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|134054440, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLHILLSAI CLCVLSSSSV LSSATDDSSA LKVAIPASSP VSAVLGGSLT LPCLVSLPRT  60
   61 PSLGRHAVLT QPRVKWSFLS SDRETEILVA RGERVKVSEA YKGRASLLNY ATSSADLTLR 120
  121 LEGLIHNDTG FYRCEVQHGL EDSHDQAQVK VKGVVFLYRH TSSRYAFTFD EARDACKDIG 180
  181 AEIASPEQLL AAYHSGYEQC DAGWLSDRSV RYPIQMPREG CFGDMDGLPG VRNYGTMEND 240
  241 ELYDVYCYVE NIHGEVFHGS TPQRFSLSEA KAYCEQQDAQ LATTGQLYAA WNDGLNHCSP 300
  301 GWLADGSVRY PIVTPRERCG GSEPGVKTVY RFSNQTGFPE PNTRHDAYCF KANSNSQTAP 360
  361 PADYMATSPE ETEQHIVTLA EPQEEYSVHQ VTQRSENEAQ GAVESFSIYS TQTASETEEH 420
  421 NHTSSPQEDI IIGSRKDLTT PTSTEGNTET IEVTWQNVGS IPEIYIDPKR NNFMLEGEPE 480
  481 IKASAVDGVK SSNHRHYQPM PDTNLEPGEP IDFIPPTVAH HGTTEEPSSP PKEINGSKHY 540
  541 QPMPDTNLDD EDHMTTQSTT LQYDSSNNTT QDASVQSTYH PDGATLETNA GNITEAPESD 600
  601 DNQGLFTHTT QPTSTSTSSR EGWLESSGED STTEKAIYLD LTTKEAVNLD STTEEPIHLD 660
  661 STTEEAIHLD STTEEAIHLD STTEEAIHLD STTEEAMFST HNSEIYRAST AETLTESYSS 720
  721 THLNNISPTD DVTDHFTLST TLRETELSES SGDHDEVLPV ILFTTPMPHL LDSLTTRAPV 780
  781 QLEISSPQQI EGVLSDSTTA SALRVVEEEV EKVEQEELGE QPETKITTST ELNHSTVTLS 840
  841 IDGSDEEESS GEPSENWTSV TENPYSNTAT ITPSNLTDLQ EHNETNSDDE DNQAITVEPT 900
  901 TDLEVTFLPH GTQTSIWQSV VTSPGELNAD VEFSGEAALT TDDMRALEES ESTNAPISEQ 960
  961 TEETLKPSST TDHNDADDDD NDNDDDELIT KAITGNEEDE NDVKTTHESF IIPVRPTQRV1020
 1021 LIRTSYISDA CLENPCKNGG TCVDSGGDQR CLCLPTYGGD FCETDLEHCE PGWEKFQGFC1080
 1081 YKHFAKRQKW EVAEQHCRMC GGHLVSVMSP EEQLFINDKY REYQWTGLND KTIEGDFRWS1140
 1141 DGNPLLYQNW YRGQPDSYFL SGEDCVVMVW YDDGRWSDIP CNYQLSYTCK KGISAFCGQP1200
 1201 PLVLHAKMFG RRQLKYRANS QVRYYCESGF IQRQNPIITC QSNGLWEEPK IMCSPAGPTY1260
 1261 SNGDLVTWRT GQNKEIVIED STTKTPEYLD IKWNF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle