YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|134054478, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNFIALLLTS TCFFSCISAK YHYNQDKDKE LKYLLEPLVF AEVSARRGHA AILPCVMRFK  60
   61 PSHYRVKWTK LEPSSRGVEN IVLITNGHAD KQYGSVGPRA ALQRAHDLDV SLRLSDLELE 120
  121 DDGSYRCELI NGIEDESVII TLRIEGVVFP YQSQKGRYRF TFFDAKEACA EQDATLATYK 180
  181 QLYRAWTEGL DWCNAGWLSD GTVSYPVLHP RPACGGDLLS GIRSYGPRHK TRENYDAFCF 240
  241 TSTSKGSVFF IEGQLNFAEA ERACRRDGAG LAKTGQIYSS WRFQQLDRCD GGWLEDGSVR 300
  301 FPIINPREHC GGIAEPGVRS FGFPSKSMRL YGAYCYR

Type	Start	End	Confidence
Signal Peptide	1	19	0.98
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	337	0.99