YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE13515
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTMKCFLVIL PLLVLYWIVS NRKRSGPLTN PHYKECLRKE WYTSPNVSST EDFGSSYQIS  60
   61 FADVQKTFKW LYLPEIDDPE IILTVMTRVD ALARRNVLRK TWMTQRNRIK SIFVIGLGGD 120
  121 VDQKTKELVM SEAALYGDMV VTNIEDSFSK VAFKMLSMLL YGFSKVPSAK FIGKVDDDVL 180
  181 FYPNVLLSYM DNNTDTIHPQ GSRMYGHITE TRFITAGIPT GAECCEKFDS DSKCANYVTF 240
  241 LGGSFLMFTR QAVEGVLMAS KHRKFHRIDD TMVTGYLADD VGAQRVNMTM MFMGYEPTKE 300
  301 PILFSSHIPL KDHEYLEQYR IQMADFKEQR LFTKYIGE

Type	Start	End	Confidence
Signal Peptide	1	20	0.96
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	338	0.99