YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE13507
Protein type: Transmembrane
Type Confidence: 0.67
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISKFERLDQ AALLTLATIA VLNFQFSTYN LKFLIPAELY THFPAIIHQE IFPATRIIAK  60
   61 LIPGIEHSAS ALRLPNTGQL FCFVETSERY MDERVPSIAS TWLRRCDNGR FFSKTPLLNL 120
  121 NITYSTVYKN LEDSYSDLFR KSIFGFYYSY VHISKSFDWY LKADDDTYFA MDHLREYLNT 180
  181 LDPSKPLYLG YKNGYNSGGS GYILSNAAVK LFVEKSYHDE YGCPYDWAED HGIGRCLARV 240
  241 GIYPTDTRDD KGLNSFVPFK PSELAEFGPD WHFYPAVQFA SQKFVSLHRL PPAMMLVLDE 300
  301 ILHPKLGRND TNPIVEMSNI LYILIKNFLS SKSSLNRWLL LIIAASFISY FLVILLEEKE 360
  361 EPYQTLSEST LSNCEQGPTK QDLHRHHTDI ADVYRERGFA DDKRGSYRRR PETAHVDCGR 420
  421 ILAGDKPYLQ SLTGTNRVKI VENCNLNMSC KAIRSRILPS NDNILRPLKH GIAFARIVYK 480
  481 DYEFIEKQVQ VSFHPQNAFC FVIDINASEE FKKRMRALAA CMPNVIVLAD EDPVYSSGHN 540
  541 VNLVHNKCLK ALLDIPGWNY ALLLQNHDLI MKSVYEMEQI FEWLGGANDI FVTHEIGRVD 600
  601 VKKLKWDPMS LKLFINETEM DKLLLTTPMK IVKGWVHCSL SRASVEWMFQ KLDPSIFMHQ 660
  661 LNQGRYGVDE QYFPILQANA EFGMPGHFTD ECLQQGKTTE FITRIALWVP ESKCDTNMTR 720
  721 HAVCIIGLEH FQAVASFTHL MFNKVSSSLD ELI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle