YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE13501
Protein type:	Globular with Signal Peptide
Type Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNVRFSWIM AIFTIFFVFT ITRKAGNSEV KVVDYIIPFV NYSKRLLTAP ENQLISCIIP  60
   61 KSMSQLTINI MCLLYEKQEY FKNDYSLNDT WTSTRNCMDE FKFIHPLEPI HKGTVKFAFI 120
  121 RDPLQRFVSF YLDKCVRENR CYDCGSNMIC IVEKVYSNLK KIQNSWDGTS ELGYVERHAA 180
  181 PMSWNCNFHK GLDSWELIPI GSDANERTIA IERLSGLLKK QGVNQTLIEK VQEGMKTGET 240
  241 EHSTHSSTGR IKAERQVRED PYIQNLLHKI YFFDYLVFPF TKDFKIPFAT SQYHRTNNFE 300
  301 TLYGS

Type	Start	End	Confidence
Signal Peptide	1	25	0.64
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	305	0.89