YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE13281
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEQRANKTS RCSISSVLFR AHSPLSSASA FNPCFVRSGL SASFPKSDSL CTLTDASFNP  60
   61 MQLLFLLLFT PYTIVGESPD FCPQHPVYGK EPEEDCAQAS DPNELPKSPL EKWFTKQMFE 120
  121 DLFPKSNIGM GPHPCLPYSY ESFIMAARYF PEFGAAHPNK QFKADEHHKR DVATFFAHAL 180
  181 QETGENDASV YNNTDLTLEQ AHECFYRGGF YNWFERGPNS TFLSPAAPGF SPFDGKRCTD 240
  241 EGRYCKSDPI IDFWYPCNSD IESHSDKEYH KGCYFGRGAL QLSWNYNYGL FQQFLLTKGV 300
  301 KVDLIENPNL VMTKMDPPLA MMASLWFYMT PQPPKPSMHQ IVTGDWKPSS KNRRAGYQGA 360
  361 IFGPTSLIIN NECGGEDPDE PGGPGESRRI KAFKWFCKYF KVPVGSERTL SCKGMLDGFD 420
  421 AVQHMYSWHP DWGNMWKSQS CDCAPAPYGG PLPYYDPKLY PHEFTKQNDR NRLRCVYSMY 480
  481 ESPETFRLDA GNSPCLKHKP KIRLTKTGIR G

Type	Start	End	Confidence
Signal Peptide	1	28	0.89
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	511	0.99