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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE13126
Protein type: Transmembrane
Type Confidence: 0.91
Topology Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCNVAEDPSS FSTITIATTC RAEWPKVSPC IADGRNHTDC CLKKGVQHDC LEICSGSTKE  60
   61 LGVHSVLCLN LDLQAIYQCI RQGYETHPSA PGNVTISELT AHSVTVQWTE PNSNAHLVEN 120
  121 YTLFIRKNEH GEAVRTVKNV ISPHVELGLD PDSEYVLTLQ SHSANGTSLP STAKLFSTLP 180
  181 TTRPPLCTIG EPIYMNDGRV MICDAVNPCP NGFRCTGAGS DLSYCCPHDG THSSEEFTSC 240
  241 CKEQKMPESC MSSCQYNMTL PESCKENLNT WVQCASEGHD HLRCCLQEEV SKPCQTACMH 300
  301 PFTVPADECF SEVSKYRTCF SAAHQALPAA VRNVEVSSIS KDSATISWED LEANIIVFRV 360
  361 QLFEKGGNLI KTENSSADIF RFIDLEPNKD YSVRVTAINF LGEGPPSWNA TFTTKPAQIY 420
  421 EGDRPVAPEK LRISWNSGPR VNVTWDPVSV RRNAEVVTKP IEYTIYYLDT EQSSTWTTLR 480
  481 TNQTWVVMRD LRKDALYYVY VTAKEDNRTS RLPEPTIVIE PDHKDGVFSP GEKISINCSL 540
  541 PNIKKHLNID LTVGSHVVQN DHGALWVILE TEADEAMDTA TCAVSDTDGR QHVAMKHLVL 600
  601 ERKASVTMKK DKIRVLDDQS VEIECIYRGG GLDPKISFEK DGKKASRGFL NLKKTEAGYV 660
  661 AKWHIRKVKQ EDAGFYKCVV TSSDGSRVEA SSEVIFSTET LPVNPKLILQ CCEDEGITGD 720
  721 CLQACNIGRT SLSIKNQNCT RFAVSLLKCA SDIRDHSDCC IASGVTSKCL PLCSGDSFSP 780
  781 DIDCSEHAVS IMTCSVKSHE HAPSEVSNVR IKASEGKVNI EWDYPLTKDY KYFAVYYRKA 840
  841 HDDHEDWHKL KTIQQNIELD VDPSEDYEVG ILAANALGHS RLMYSAIPKD SEPRRSASKG 900
  901 SSSAFWIVVI LVVFGVLIAG LAVLSKRREL PYPIGKFIGR RNDPNQPTVA FENPAYGEPW 960
  961 GGAEVEIRGL GGSATTGTAA ATQSEWQSAN LEANSTTDNS HEYRNGMRYA KLET

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle