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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LAC16_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIPRRFCIC VLTFFVFVLL SPTTVHSIIR HYKFNVMTNT TKLCSSKPIV TVNGQFPGPT  60
   61 IVAREGDTIL IKVVNHVKYN VSIHWHGIRQ LRTGWADGPA YITQCPIQPG QNYLHNFTLT 120
  121 GQRGTLWWHA HILWLRATVH GAIVILPKLG VPYPFPKPYK EKTIVLSEWW KSDVEELINE 180
  181 ASRIGTAPSA SDAHTINGHS GSISNCPSQS SYGLPVRAGK TYMLRIINAA LNEELFFKIA 240
  241 GHVLTVVEVD AVYTKPYKTD TVFIAPGQTT NVLLTANANA GSNYMVAATT FTDAHIPYDN 300
  301 VTATATLHYI GHTSTVSTSK KTVLASLPPQ NATWVATKFT RSLRSLNSLE YPARVPTTVE 360
  361 HSLFFTVGLG ANPCQSCNNG VRLVAGINNV TFTMPKTALL QAHFFNISGV FTDDFPAKPS 420
  421 NPYDYTAPVK LGVNAATMKG TKLYRLPYNA TVQIVLQNTA MILSDNHPFH LHGFNFFEVG 480
  481 RGLGNFNPEK DPKAFNLVDP VERNTVGVPA GGWTAIRFIA DNPGVWFMHC HLELHTTWGL 540
  541 KMAFVVDNGH GPDQSLLPPP ADLPKC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle