YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	KCY_DANRE
Protein type:	Globular with Signal Peptide
Type Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPQVVFVLG GPGAGKGTQC ARIVENYSYT HLSAGDLLRE ERSRTDSEFG QLIDSYIKEG  60
   61 KIVPVQITIN LLRKAMEETM KADEKKFRFL IDGFPRNQDN LQGWNTEMDG KADVKFVLFF 120
  121 DCSNEVCIDR CLERGKSSGR TDDNRESLEK RIQTYLQSTR PIIELYEKQG KVQRIDASRS 180
  181 VDEVFADVKN ILEKDD

Type	Start	End	Confidence
Signal Peptide	1	20	0.67
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	196	0.99