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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE12954
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVFKYSILLL LLLQYTRESL GLFLRVETGH QNIAIDGRDV YYGHYTKIHF HNVTCIDALD  60
   61 IHCLKELTGA EEIDLLYTEC QKGHWKVAHY TNAKHHFRLK EPIHALRLLI SSRRELSVID 120
  121 AQVQSCSYPP APPSECHRAA RNHNHRHGKS GSILRAVDPY SQLEAEMEAE IEAGARALAR 180
  181 ALTPSTPPVT TRSRRVRRDV EDITKQDQDV QVMHGDQEIT EDKVVPVGSQ LDVAAGSKWK 240
  241 FRKGVGLVVY GSLNLKGNTN QPIIFEPSTK NARWRGIEFR NSSESSLTHV NITGADVAVS 300
  301 VKSGTSPDMD HVVVDGNVYG VQISDMDLFE LYYNAVSGDH TKKVLIATGF TKNRPNLKLE 360
  361 NPELSIIWYF FITFEINIVT DIIGSISIDR AVSASNGEVG ISISTDQKVT IRRSSSYSNK 420
  421 ATGIYVGTSE ITIENVVVNA NGFYGIHAEV EKRFEMDGVN VSAHRGEFAL ELFMSGNAKI 480
  481 GIANSRFHDN KKGENGKISI SNNKFTKNTM HDIVKLLESV PSSEIFITDN EFNQNLANSI 540
  541 ITTNSVNISI SENLFQDKRS TCEITYNSPA MPKIEDLTQN KMLSGNTNPI CTGLGYQTIQ 600
  601 MDAPISSTPL PLVGVTENPF KNQKGLIKAS SEPYIINEEV LINVGEIVVI EPGAIFDFAP 660
  661 GVGITVSGQL VMNGTEDVPI VTRGQNGNTW RGIVAKPEGV LDVKNVVSED ASIGIWIDSQ 720
  721 KVKIENGQIV RPAVHGIEIT QNSNDVVDLG NVIIEEANES AIGVDERRDD LLIKNVKIQN 780
  781 GAGSGIDFMT PTGNIELQNI EVKNMGGYGI HISEFPSSPL HAVLLDNVSV IEQKRGHAGI 840
  841 LISGGWIQNV GMHNLKFKDN AVSSLIVALE CNDGNEKLIK MENSTFERNT DIVQHIQLGS 900
  901 CANLQMEKNR YDSNNIDGIG STLVITSENN EKKKNGVMEI VKNNFTNNGG IYTVTVDTNL 960
  961 HDAYFTDNNL KGNENSGAVL KISGENVKIV TNNFDNKDSK YQIGYSDDSP IDATFNEWNG1020
 1021 LDEDAVLKTI DAKEGSVLVV PYGSSTITTD NQIDALTTVV PVTVPDSLNI KCAHLAYCSR1080
 1081 RGTCKEGICI CPHGYTGFDC SIPLFCNCSG NGLCNLLNIC LCNDGWSGSD CSIPRCLTNC1140
 1141 TGHGKCIQPN SCECDAGWMG ETCSVTSCID SQCTHGHCGT NGLCKCEDGW QGSRCQIPLC1200
 1201 NSCSLNGICT RPGFCSCFED YGGSDCSKCV GDSCEACDFD CNHGICEPLT KTCSCAKGWM1260
 1261 GGACDVCSIG KCENSSQIYY IQPPTAELED VNTVVNVFGE GFPITNNNSY ICTFGRTSVT1320
 1321 GHRVSSALIR CPIPSNLTLG RHVFGVSQPG LLSAIGNSEP KPIHFTLYDG CEPSLCQGSC1380
 1381 VGPLCICPQG KTGIFCDVIE VLPTIDKRFL EHQKANTAYE GVPYVLMLPT MASSVLRVNS1440
 1441 SIPNLNFIAS KGIVAWPEPI GSPDPYEVSV TAFSPAGETT ISWNITVQPE YAVEVQNVTV1500
 1501 DGGKAKLKGK LIGPAAASSR KNPVVIRVRR DDIVDEILAE SDTFGDVNFE YIPMLPGIYE1560
 1561 VTMAHPNVPT DSIQPIRFTI PDLNLPIIGE SSNSSLTLDI SQREDCEVKV IQPKVDNVKV1620
 1621 EQHGSQRIVN FGRFWDGEVL ATVMCGDVPM EIVRAPPIQS SGSLLTTPQV LSLYGNENLY1680
 1681 EVKVHWDPEM TFNPSVTASD SSFDETPVTI PEEQYLRMTF STVGESIGNG TIQVKDGENL1740
 1741 MATIPYFYAD ANKSQYYTFK ICVRDEWDGQ EGRLASTEVA TIAIQNTQKG VDVTKTNIRL1800
 1801 NVQWADFSLQ PGTYNLLVRS ELHEPVEEVI ELSPLNTSFC VPMISSRSRN LPTIHCSHFT1860
 1861 DPASCDVAVT SVASPDNQLP SFHFEPSVVT KKGQKILVTP RGNLDGTIGL WNSEIAGITV1920
 1921 TPSKRSVSLN ESFWITFSWK DHNLIKCNVK TIPVHFVFLP NESQSEVPVH SSSNILIRQK1980
 1981 DDGNEICDSK NQPIVPATST LVMCNCGDGA RTRCREKYHS ATACGGSWNK IADDTVSLEV2040
 2041 VASFLAMVFE CREVSVDFAE LRRSLECVAS IESDCPINSR RRKREDVQMQ NDAPFGIINS2100
 2101 INTDFGKVLP VLNALDVQTI RISSVFIEFV DQIQKIFPEE IMSLLDKDAV DRFLGAIADQ2160
 2161 SDEGLMISEA ERRIIGSSAS SLIQLWNLTV KSWKSGKVPT ERTGISHQDA KQLVAAADKI2220
 2221 KSISRQNVAQ DPFAMLHGYM ERILETGLTE QTECAMSTVF IDKTEIEEDG QLRIHVYIKN2280
 2281 RANMTLTNIA VRLSFLKSDS KTPTVNFNTG PSWSAGVASL NGLGTFETGS SFEIHWTRIL2340
 2341 SAPRRLTTVA KYQPIVVFSF SIMGRLTQQK LFAPEISVIP KKTIRAINII KDDLSPKAGT2400
 2401 NFSIISAIIN HGYTPLKNVE IIMDDLKHEG SVTPRLDEIF VNGKETQKTL TPKFLTIPSG2460
 2461 STQIIRLILK DRDDGIVTIS SMNLTCLENE KLLPLETTET YAIRAVGISD FGMLLATPNQ2520
 2521 SAPLFFFRPT AAQMVNVIKL EFLSIQQINS TDSNRKSFVA AFRNPESSSF GGALWARMPV2580
 2581 PEVNAMNKLI SIVDRGGPRP RELQAVEWTS EENNNEMLNW IDPGPVSSAQ QMFYELQFSN2640
 2641 PDASTPEDEN PQFDQLQFRI EIPQTNIAPE TEIGQIEATS PEDLTYFLYT PDNNRRFSVD2700
 2701 SENGRIFYDS DDPLSNEQEY CVVLEARDPQ GRSTRVPVAI NNGGQRRDCM LFSTNNLTPM2760
 2761 IHFGDYIPAP TILTPRTFLF TTTQPTSRVT PDTTRITDFY TRTTSSGTTS ETSTSTSSQT2820
 2821 VSETDGTTSM FQTSEPSTWQ TSNEPTSEPT TVPLETSTWQ NTDGTSMEPT SVTPEEGQTT2880
 2881 SPTATTLTFV DSTLETVTTT EATTTSEGTT SQEDFGTTSM TTSESEGTSP EYITSEATLE2940
 2941 PITSTVESTT TIMISTISEL ISTSDYTTQS SDSTSMEPIM SSTSTFESSA FPTPDGFTLE3000
 3001 PITTTMTTEY PDGTTMTSPD ATLPILTTTS SEYYTSTQES IASSTSEVTI ILPTDSTTFL3060
 3061 TPPPSTTTEL IYTVSSDGTL EPITSAPTTI GSSSEGPTTA TSTEPIYTAS PDTSPETEAT3120
 3121 IGPPIRISTV GGGDTYVTST PGQGSTVTTQ SPIDDTDLEC ASTTAALSAY SKIICDIQAI3180
 3181 SRRRQRSQTS F

YRC Informatics Platform - Version 3.0
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