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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE12928
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNIVLFLLLF PLVSTKRYCT TWHTIKSGDT CWKIASEASI SVQELEGLNS KKSCANLAVG  60
   61 LSEQEFTEMN EELDCNRLAV GNEICVSIGT DLDPDVNYYT TTLPTLPTTT RAKCLKKIHV 120
  121 KEGDTCYTIW TSQHLTEKQF MDMNEELNCG MLEIGNEVCV DGGLIDVENG NAPLPMIETP 180
  181 EICSEYATVT PGSSCYTISA SYGLNLAELQ TTYNCDALQV DDTICVSKKF SCQHRIEILN 240
  241 GDTCGFLENA FQTNNTEMEI ANEGVKCDNL PIGRMMCVWS ADDRKLPNMT CTEWKTITDD 300
  301 SSDCYSEAKK LSITIDLFKF LNPRVNCVNR QKILRGSRIC IKSQSTKPCT YFQMVNQFQS 360
  361 CEDIMQRSQI SMRKLLELNP TFRCDKMAKY EQICLGIGPF RQEQCISSRR VTPENDNCDK 420
  421 IMRPTGLSRE QIEALNPEVN CWESFEWGTL ICTASLGVDT KNAQNLVVTS LKDVSPELAR 480
  481 KYDIYTSNPT EAAENDMNEQ LVRDLQNPNV NSKLKELYKS DERIRKILDS QHPLPRQSYC 540
  541 DEIQKTTMGY NIKSCYCGNE ELLIYCQVLV SNFMTEGEDF NEESQNVTTL RAFRSKRGVG 600
  601 CNFNHPFSGE DSLEYFTKIH GGCFGGGCSF PVGFLEISID ADICAPLISF GIDSLSYCTK 660
  661 DGNDCNQVDK GDAPGLKFLT ERKVGGKFSL CAIGSKLVKI LSKGGVSLCW DIVATDYYGF 720
  721 VGKLSISSDL NLIAFDLEGG AVMKVHGLAF PEICDRVDFE CEDYCIWKNK NWENGKAYGF 780
  781 FNFRLLKVFG FEGIKIFSET FDAPKRVGCD AGKEAAVVIR NERTCRDDQD RDVERRCWSG 840
  841 DDMMNWEFLQ LEWGFAFKPK PFGGTLFVCE FIDRHEQKIG FDVYGGKSKN KGKNTFYYAV 900
  901 RNDGIYFGTE KYKEDQLMGS WDNVCEEDKE SEDDSSTADS AEPTGSSSVP AASCGKRIVG 960
  961 YYTGWGEREI TENQLKKLTH VIFAFVAMYA DGSVKFGPVS ADDPGPQAGK KAERRFVDMK1020
 1021 KKARAVNSGV RVLFAVGGWD NSQYFSSVAA DSGKRRNFVD SVASFIEHHK IDGVDLDWEY1080
 1081 PEMKGGDKQN HVTLIRELRE RFNGMASRNN RKDPYLITLA SAAGEWNLRE GYDLKGILNY1140
 1141 ADFINVMTYD YYGAWESKWG AYTGTPAPLY FGSLKGFSGK LNADFSMKFY ACNTKKPSQL1200
 1201 TMGVPFYGRY WKNVLEPIDA SDNMWRTAAP QNGKYEGGYV GWRNLEKEGW NKGSATWHKK1260
 1261 TKTPYIMNNG ARMFLGFENE RSLKEKMDYA TNRNLGGLMI WALDLDDDAD TLLNLVSSAG1320
 1321 LCSGGSGDKI TYKCVPIDDV RWWTPENSDE NRQGQCGKSA PLINGFYPVC DPDDPGFSCC1380
 1381 GAAGYCGSEE EYCECKGCVN YRKDPDLIVK EPVKPSREIQ WYTQDAPDGK RGRCGKDIEK1440
 1441 INGKMPICNP DDDTKYCCSN GGYCGIGDEY CKCDGCVNYR TTNG

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Created and Maintained by: Michael Riffle