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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CRK20_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSLICFIFL FLFSFITSFT ASAQNPFYLY HNCSITTTYS SNSTYSTNLK TLLSSLSSRN  60
   61 ASYSTGFQNA TAGQAPDMVT GLFLCRGNVS PEVCRSCIAL SVNESLSRCP NEREAVFYYE 120
  121 QCMLRYSNRN ILSTLNTDGG VFMQNARNPI SVKQDRFRDL VLNPMNLAAI EAARSIKRFA 180
  181 VTKFDLNALQ SLYGMVQCTP DLTEQDCLDC LQQSINQVTY DKIGGRTFLP SCTSRYDNYE 240
  241 FYNEFNVGTP QDSSPRPGKG GNSSVIVIAV VVPITVLFLL FVAFFSVRRA KRKKTIGAIP 300
  301 LFKVKRKETE VTEPPAETTD GDDITTAGSL QFDFKAIVAA TDIFLPINKL GQGGFGEVYK 360
  361 GTFPSGVQVA VKRLSKNSGQ GEKEFENEVV VVAKLQHRNL VKLLGYCLEG EEKILVYEFV 420
  421 PNKSLDYFLF DPTMQGQLDW SRRYKIIGGI ARGILYLHQD SRLTIIHRDL KAGNILLDAD 480
  481 MNPKVADFGM ARIFGMDQTE ANTRRVVGTY GYMAPEYAMY GKFSMKSDVY SFGVLVLEIV 540
  541 SGMKNSSLDQ MDGSISNLVT YTWRLWSNGS PSELVDPSFG DNYQTSEITR CIHIALLCVQ 600
  601 EDANDRPTMS AIVQMLTTSS IALAVPRPPG FFLRSKQEQA ERACPSMDTS DLFSIDEASI 660
  661 TSVAPR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle