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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CP255_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPVLVLVLT LSCLLLLSLW RQSSGRGKLP PGPTPLPIIG NILQIDVKDI SKSFSYFSKI  60
   61 YGPVFTLYFG PKPTVVVHGY EAVKEALDDL GEEFSGRGSF PIVERMNNGL GLIFSNGTKW 120
  121 KELRHFSLMT LRNFGMGKRS IEDRIQEEAS CLVEELRKTN GSLCDPTFIL SCAPSNVICS 180
  181 VVFHNRFDYK DENFLNLMEK LNENFKILNS PWMQVCNALP AFIDYLPGSH NRVIKNFAEI 240
  241 KSYILRRVKE HQETLDMDNP RDFIDCFLIK MEQEKHNPRT EFTIESLMAT VSDVFVAGSE 300
  301 TTSTTLRYGL LLLLKHTEVT AKVQEEIDHV IGRHRRPCMQ DRTRMPYTDA MVHEIQRYIN 360
  361 LIPNNVPHAA TCNVRFRNYV IPKGTDLVTS LTSVLHDDKE FPNPEVFDPG HFLDENGNFK 420
  421 KSDYFMPFST GKRMCVGEAL ARMELFLLLT TIVQNFNLKS FVDTKDIDTT PMANTFGRVP 480
  481 PSYQLCFIPR 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle