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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ATLA3_RAT
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSPQRTAAV ASRGAGDAME NGKPGPVQVV LVHKEQHSFE LEERALASVL LQDHIRDLDV  60
   61 VVVSVAGAFR KGKSFILDFM LRYLYSQKEH GHSNWLGDPE EPLTGFSWRG GSDPETTGIQ 120
  121 IWSEVFTVKK PCGKEVAVVL MDTQGAFDSQ STVKDCATIF ALSTMTSSVQ IYNLSQNIQE 180
  181 DDLQQLQLFT EYGRLAMDEI FQKPFQTLMF LVRDWSFPYE YNYGLQGGMS FLDKRLQVKE 240
  241 HQHEEIQNVR NHIHSCFSDV TCFLLPHPGL QVATSPDFDG KLKEYIASEF KEQLQTLIPY 300
  301 VLNPSKLMEK EINGSKVTCR GLLEYFKAYI KIYQGEDLPH PKSMLQATAA NNLAAAASAK 360
  361 DIYYSSMEEI CGGEKPYLSP DILEEKHQEF KQLALDHFKK TKKMGGKDFS FRYQQELEEE 420
  421 ITELYENFCK HNGSKNVFST FRTPAVLFTG IAVLYIASGL TGFIGLEVVA QLFNCMVGLL 480
  481 LIALLTWGYI RYSGQYLELG GAIDSGAAYV LEQASSHIGN STQAAVRDAI AGRPPADKKS 540
  541 Q

YRC Informatics Platform - Version 3.0
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