YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	cnc-2
Protein type:	Transmembrane
Type Confidence:	0.69
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRSILILLV ALIAFSTAQY GYGGYPGMMG GYGGYPGMMG GYGMRPYGMG YGMGMGGMGM  60
   61 YRPGLLGMLM GK

Type	Start	End	Confidence
Cytoplasmic	1	4	0.67
Transmembrane Helix	5	23	0.64
Non-Cytoplasmic	24	46	0.85
Transmembrane Helix	47	66	0.77
Cytoplasmic	67	72	0.72