YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	cyp-33C8
Protein type:	Transmembrane
Type Confidence:	0.64
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFFILVLVLT GISIYLFHLL YWKRRNLPPG PTPLPLFGNT LPTLFDIPGY KTFGKLKEQY  60
   61 GDAYTFWMGK DPYVMICSYD LLKETFIRDA DTYKDKDYNP IDEKIRGGIY GILQTNGHVW 120
  121 NTHRRFALTT FRDFGLGKDL MQQKILIEVE DMFRKLDENI GEEQDVPTVL YNAVANVINQ 180
  181 IIFGYRFEGV KQEEFTKLKE LMEYLETAFA TLKIYVEIFV PWIGKLLPGK SLDDVLNYWK 240
  241 DTSYEFFNSQ IENHRLKIDF DTEESLDYAE AYLKEQKKQK AQGEFELFCD KQLSNNCLDL 300
  301 WTAGLSTTII TINWTICYIM NTPGVQEKMQ EEMDKVVGGG RLVTTADKND LPYMNAVINE 360
  361 AQRCGNIVPL NLLHCTTKDT VINGYSVKKG TGVVAQISTV MYDEKIFPDP YTFNPDRFID 420
  421 DNGKLVKIEQ LIPFSIGKRQ CLGEGLARME LFLFIANFLN RYHISPGSSG LPSLDKSKGI 480
  481 TPRKFEPVLS RRHA

Type	Start	End	Confidence
Cytoplasmic	1	2	0.52
Transmembrane Helix	3	22	0.58
Non-Cytoplasmic	23	494	0.89