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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE12580
Protein type: Transmembrane
Type Confidence: 0.91
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCSLIAQSMT SQYSTMSFEH RDRMLEGIGW KARGDRIPEF PNPRPFFPRL KHSIKLIPLF  60
   61 VRVALHTFVE WWNGREAFID IFNVFRHFTY TGELHFSFFS LIFAALSFLS VPLGGIGCGS 120
  121 IGTDFRGGFN RFSIIPGIKE QTETQKCNQF IVTVHSKKTF ELIYQSILSC AEFPATVLPK 180
  181 WDTTIPAEDV RYRGLFPRAW QEFRLGSSGV TVVVEHLSPV IPGDYSDSSL PLANFEFHVF 240
  241 NDSYEEVEVS ITMSFRNGTG NRKWNDENLC QSQKIQKDTM VVRTLAHTVK GMPVTYAIGT 300
  301 EEKNGSKVTT CLFDPNGTGG RLWSDLEAYG HLSSYDHLPS KPKELGIAVC SSFFVPPDGA 360
  361 HNTQFSLTWY MPQVHFGTAE RFYNRRYCRF FNGPDADEVT AAICRHGLQN FSTWQKKIED 420
  421 WQAPVLNDQK LPEWYKSAIF NELYYIVDGS TVWFEYDPDW KTEESLMSEQ TEKQFKEYGR 480
  481 FGYMESWEYF MINTYDVHFY SSWAILKNWP QIEMSMQLDF ADQMDRVDNN IATSLADGEQ 540
  541 MTIKSVDRIP HDMGHPTKGC IQEKRLSVAD PWIHTNAYIL HDTGRWKDLN LKFVISCYRD 600
  601 WKLIELGSEK GQVLEFFLGK CTKIVDGALE CWDKDNDGMI ENDGFADQTY DVWKMTGTSA 660
  661 YCGSLWIAAL SSYIEMLKQS GLPTKHYEEK LEMAYDAYIG KLWNGTFFKF DELPENSKIV 720
  721 MADQLCGFWA MTAMDEPVQI SKDKMKSALD TIFKYNVQMY NNGRCGAVNG YLTSERVDGS 780
  781 SIQSEEVWAG ITYALSAMMI EKVDLNNIFC LLCNNFGKIS MKLKLLYLFV AITIKFSEFS 840
  841 HKIRVFSGKK LVSSKSENVL NISIALPNSL ALPISIASGK TIEK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle