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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE12116
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYLACLSSCS SNDKLAFDVG VQETNEGEAC WWTIHPASKQ RSEGEKVRVG DDVILVSVAT  60
   61 ERYLHLKKGK TEEEASLMLL FCGRNVLLLF HQHMAYSKGY MVIASFHQTL WNIQSVSSGS 120
  121 MRTRNMGFLF GNDVLRLFHG NDECLTIPEN WSEHPQHNMV IYEGGAAVTQ ARSLWRVELI 180
  181 RMKWHGALVG WEQVFRIKHI TSGRYLGVLD NSVQLYHKEK ADFDLTAFVM CQNKDPKKQM 240
  241 LDEKEEEGMG NATIRYGETN AFIQHVKTQL WLSYQTTEVT KKGLGKVEEK KAVALKDGHM 300
  301 DDCYTFFMAL EEESKSARVI RKCSSVLNKF LKGIDALQLE GNQSTDWTRV DLNEVLKLME 360
  361 DLIEYFAQPN DEQDFEEKQN HLRALRSRQD LFQEEGVLNM ILDTIDKFSQ MEALPDFAGL 420
  421 IGEETHVKWE QISTYLYLLV AAMIKGNHYN CAQFASAQRL DWLFGRLSNP QSAEGILDVL 480
  481 YCVLTESPEA LNMINEGHIR SVISLLEKVG RDPKVLDVLS SLCEGNGMAV RSSQNLITQY 540
  541 LLPGKDLLLQ TSMRDHVSSM MPNVMLGVVE GSALFRKWYF EAEVEHIETM TKQTPYLRIG 600
  601 WANSVGFKPF PGSGDKMGCN GVGDDFYSYG FDGKSMYFGG KSRRVGHKLL EKGDVIGCSI 660
  661 DLTIPEIKFS VNGTYMSGSF KKFNIDGYFF PVMSLSAKVS CRFILGGNQG RLRYGPPTGF 720
  721 SAVVEAVNGE LQITDCLSFG DLGKNIFSGP QTIFNNLEPF IPTPIDVSAT QLNHHATEMH 780
  781 QKYAENLHEL WAMRKIELGW SYGETRSETS RKHPCLTKFE YLPETEKKYN ILLALTTMKT 840
  841 IEALGYHLIT EDPPCRLRAV RLGPNFQQQN GYKPGPLDTH EIQLPAELQP LTEALARNTH 900
  901 NIWAKEKIKR GWTFGLSEHV DATQKRSPHL VPYEQVDERI KQANRESAAE NIRALQLFGI 960
  961 FLEPPAHEHD EVAEKELRAR KDNTRTYRAE ATYAVCGGKW YFEFEILTAG YMKIGWMDIG1020
 1021 STPEIQLGAD DRSYAFDGYL GRKWHQGAET YGKEWKIGDV VGCFLDLNDR TISFSLNGEL1080
 1081 LLDPSGSEMA FDNVVCGDGL VPAMTLGSGQ RGRLNFGQQS NSLKFFTTCG LQEGYEPFCV1140
 1141 NMYRTMPMWF AKQLPRFEDI STLKSGSILE VSRIPATGNS PPCLKILQKV TISEGGPSEK1200
 1201 AKMEYIKLSL PVKCNDTFVK NKDKETIRRQ LQEYKPRSQS VVSQIRAPGI PKEFDDNKEK1260
 1261 KGFLRSMLGS KDSHESDDDR RSRTNSKQPS VDGDEPPAVR RSLLELPHDE RQIAEDSMRD1320
 1321 LNDRHSEKPK KGGLLSRLRD SSNTRKNFRD SDRRKEEKAA QLRQMKANSR SFDAGSLDTS1380
 1381 TLPTGQKDVL ASSEMPLSGP GRQLTIKRSS IKKNKKGKKA EIALEKMERE KKGSIIPMDA1440
 1441 QLDVLQEGDA HALVHHKDKV DEYYYGIRIF PGQDPSQVWV GWVTTQYHYY NVNFDGSQGV1500
 1501 RKCRFSEADH HGTTVDSVQS QNCYMVNVSE LLATTPDVAN TKVSGTLIGC IIDTSIGELS1560
 1561 FQVGSTDTGI KFKLEPGAML FPAAFVTPTA TEILQFELGR IKYTFPLSAA MFKSCEKSLV1620
 1621 PFCPPRLTVE QIESVYWARV PNETLRTTAL KLSEVRGWSV LCNDPVRIMS VYIPEKDQSL1680
 1681 DILEMIEMPD MLEFHRQTLN LYCKLASHGN HKVAHTLCQH IDEDQIMYAI KSHYLSGPMR1740
 1741 QGFHDLLIGL HLMSHTAARN SMAKEYVIPL VPQLQIKNVL DPDSESRYPQ ITGESVSMLS1800
 1801 QMASEPVKKH VSREDEMKLL PPSVDFEALK KHVMESLQSA THHAVMNCRD LIGGDNTNHF1860
 1861 EPLFKLFDQL LVIGLINDEE LECLLRLIHP QAFDENYETG TTQKGLTQLE LAEPVKIQLV1920
 1921 SILDHLCDIQ LRYRIESLVA FTEGFVGELQ SDQCKRYMEI KQTDMPPAEA AKKTKEFRCP1980
 1981 PKEQMFRLLM CKVKEERDPE LMEEDADVDQ CPMAEGLQQQ LRDFCELLVG KIGNVKEGDS2040
 2041 DDQLALIESE EGSWVDSFAR IVVKVPPPVL EEGMEMQKKG TQNFREIIVT MLREWAQADF2100
 2101 IESKSLIRNM FRLLLRQYSG IREIRDAMSQ TYVFHERNEK DVTDFLVYLI QIRELLTVQF2160
 2161 EHTEEAILKR GLWKLMNNRI FFQHPDLMRL LSVHENVMSI MMNILTAQQG TVEHEGDELK2220
 2221 EKAPIKDASE MVVACSRFLC YFCRTSRQNQ KAMFEHLSFL LDNATMLLAR PSLRGSVPLD2280
 2281 VAYSSFMDNN ELALALKEEE LDKVAVYLSR CGLQPNSELI TKGYPDIGWD PVEGERYIDF2340
 2341 LRFCVWINGE NVEENANLVI RLLIRRPECL GVALKGEGQG LFSAFKEAIA LSEDIRLLEN2400
 2401 DSHPSLLSSG LLGENPTYPS KDAEGEDYID LGAATLDFYS SLVDLLAKCA PDPMAIQAGK2460
 2461 GDSLRARAIL RSLISLDDLG QILALRFTIP NLAAPSIEAV RRANAVQASH TQKAVMAHTF2520
 2521 AMVASLASEV SNTRRSQTFT SGTNLAKRGL PCVEEVDTDD SKSSDYASVH TSFSSGNELF2580
 2581 APKAEKEKVD VLKLNENKYP IIQRRRSSRF NPIDNTGPLP GLLPNHKGSV LLFLDRVYGI2640
 2641 DQQDMLFHVL EQSFLPDLRA ATMMDSPRAL ESDTALALNR YLCNSVLPLL TNHSHFFADA2700
 2701 EHHSALLDAT LHTVYRMNRL KSLTKNQRDA VSDFLVAITR ELPPAMMIKL LKKVITDILT2760
 2761 MNDMNVLVPL RLITLHYERC GKYYGSGNHY GVASEQEKRL SMLLFDAIFD TLGSRPYDPE2820
 2821 LFGKALPCMT AIGSAISPDY TLTSGLEDVR NKRREEEGAW IPRTVDVSRC EINRDLEKMT2880
 2881 ELFAEHFHDS WASRKLEKGW VHGDLYSRAN FTHPRLKPFA LLKDFEKSFY KERCSECLKA2940
 2941 LMAWNYSFEM MDRDANDRAS AARTLSGTSI SNFAPKPIDL SSMTLEKDMV NAAEKMAEHS3000
 3001 HLIWAKKVMN DLNTKGGFMP IPLVPWDLLT DFERRKDRFR ASEILKFLQY HGYHVNCPKD3060
 3061 EQSQNDRLKS EGERTSVEKR FAYNLLEKLI TYLEQASLKM KSVKPSQELT RRNSFKKEGQ3120
 3121 DVKFFEKVVL PLMHAYFNAH KNYFLEGSSI VQTGTASNKE KEMVANLFCR LAALLRIKNR3180
 3181 AFGSVAKITV KCLQGLTQAL DLRTLVKVNS DIVRTSLLTF FNNCADDLYA SVNELKDGGQ3240
 3241 YSLIRGQALK SWNSFEFANQ MIVPVLTTID QLKNLSVDDI QAACYKILDS LYMVTGLSSS3300
 3301 ISHRKSISGE SEKHRPGLGQ CLAAFASCFP VAFLEPEFNK SNKFSVLAKS QDQSVQVQEM3360
 3361 LQNLSTHIPH LEKLLTDLET VANNNTMYSD VPNVYDVDLP LMCSYMAHWF SVGPDGKRDK3420
 3421 EDQRASVVQT TSVSCDHINR IFNALLKMIR NHVGIENAPW LCRVNFFAVQ IIQNVTSDPV3480
 3481 REFVLPIAER LRRMSEKAYK EEEHMRTHPD DADEGTVAED NARLVRDTYA FFPILMKYTD3540
 3541 LHRAQWLKTP TWETDGVYEN VAVIFRIWSQ SQHFKREELN YVAQFEEDAA ATGGGDMKTG3600
 3601 KAAIAERKKK RREGQDKMKE YFDRNGRPII KKDKHAASIV IACLKRLLPV GLNVFGGREL3660
 3661 DIVQQSKEKF IQKETEEKIR EFIKGLLEIP VKTDPTDKNA WQLSLYRKIG KSQMRGKDEM3720
 3721 SQDAVIEKIF NMGQVSAILH TTEHPQMQLS QAWKKVVSTQ RKRAVVACFR MVPLYGIPRH3780
 3781 RGINFFLPAF SRLWMEEEDA GQDQLIADIC SGVEEEEGPR IEIIMEEGVP IVASSEDTKE3840
 3841 KETNPDPLKQ LIRCFQRAAT SEETAASAIH EDSLYIRFAD VMAKSIHIEE EDGEDGEEGE3900
 3901 IDQAAKEEQS QALRGEQAVL ASRGAAIMCL MYLSASGGEP NEMVAQTLQL GIHLLSGGNV3960
 3961 EIQKMLIEYL QLKKDVRFFT SMAGLMNKCS VLNLEMFERQ IKVPTDTAEG LGMGAELASG4020
 4021 DNQNLNDADF TCSLFRFLQL TCEGHNLEFQ NYLRTQPGHT TSVNLINCTV DYLLRLQESV4080
 4081 MDFYWHYSSK EVIDEGGKEY FLRAIQVCSQ VFNTLTESIQ GPCVGNQMTL ANSRLWDAIN4140
 4141 GFFFLFAHMM EKLYKNSTQL ELLREFLNLQ KDMIVLMLSM LEGNVLNGSI GKQMVDALVE4200
 4201 SQPSVEKILK FSDMFLKLKD LTTSQAFQDF DTNQDGWISP KEFQRAMESQ KMYTVEDITY4260
 4261 LMMCTDVNND GKVDYMEFTE RFHNPARDIG FNLAVLLVNL KEHITNDPRL EKIIEKAQTL4320
 4321 LEYFDPFLGR IEIMGSSKRV EKIYFEIQES WLEQWGKQQI RDSKNSFLFN VLQDDGGDQG4380
 4381 KLEAFINFCE DTIFEMQHAA AISSGDSDTK MERAIKQRDY FLQQTSADHI SETFKSGYNY4440
 4441 GISAASALSP QNISTTMRNV SSSVRQMSWT QLLYAVIILF IRAGLAIGWA GYLLLMTIFR4500
 4501 FGYFLTTSSE EEEAARQEKE QAKMNNEHPS FNPPIIQEFH HSHVGVTAFG VGMNADHLNV4560
 4561 NSLPDFVPPE RPETPETVLE EEKPLNQETS PPTSPTSPAS KAPSIYESIG APQMVQLQSE4620
 4621 ADFQQGQYEP KIAESNSTKS RGSILNMLAR NFKTIEKITL YLAFFINVIL LFHRVDISHA4680
 4681 ENAEAASEGD DDEDALESIF ITGMQFPYVE YEITGWMLAQ ILYWISVLHL STSFALLVSF4740
 4741 YQLKIPLITF KREKEIARKL MFDGCWITEE DSEELGIVDT FMWYLDRIVV SAKSFPMMYW4800
 4801 DKFVRRKTRS KFKDQVDEET LTSILGEEKM STDSSYDYRY SCWLWIGVIL TNGQFLYRVG4860
 4861 YLLCSACGVF LSPFFYAFHL IDVVLSFPML KAILQSVTHN LQQLILTIMM TLVVVYLYTV4920
 4921 IAFNFFRKFY VQEGEEGEEP DRKCHNMLTC FIYHFYAGVR AGGGIGDELE SPYGDDLEYP4980
 4981 RMFYDISFFF FVIIILLAIM QGLIIDAFGE LRDQQESATE KLESSCFICD IGKETFDRMP5040
 5041 RGFEIHTTKE HNFANYLFFL QHLVNKDETE YTGQETYVRE KYDNRDWDFF PVGECFVKQY5100
 5101 EDQLLQS

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