YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE11838
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSNPASPLK IVLLVLTLVI VVQLYKSATA EIPPLRQESF LIMKKRLSSR MAPTARLGNH  60
   61 MFELAAVLGI SRMLNRTATF FIEDEIYRRM IESSKEAIPG LVGQFEILNG KVPLYIKNTK 120
  121 LNTRCCVFVD PLIHEHNNDE YLHLDGRFYQ AWKYFPSMRN ELIGYLKTSE NFGSLPKSNE 180
  181 TSFVTCVHIR RGDFKRVGFA ESDEWFIRKA KEFVENKEAT SKPCSHVVLF GDDLPFMKNL 240
  241 YENESTHFVS VNSPSDDLVY AKNNCDTVLI TAPHSTFGWW MGYFSKGDKV YYMDIRETRD 300
  301 NVYRNGGLNP YDYYLPHWTP LKFAGDNTTI VESLK

Type	Start	End	Confidence
Signal Peptide	1	30	0.97
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	335	0.99