YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE11708
Protein type:	Globular with Signal Peptide
Type Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRESISDLMT VMIPLLIILL LSNYSKSVDL EFYLDTPELI KSWGYSVEIY NTTTKDGFIL  60
   61 ELHRIPYGRE VPTSSDVNNS RPVIFLQHGF LCSSFDWVAN SPHQSAGFVF ADAGFDVWLG 120
  121 NFRGNTYSRK HVSLNPDKDP KFWDWSWDQI SEYDLPAMIG KALEISGQES LYYTGFSLGT 180
  181 LTMFAKLSTD PKFSRKIKKY FALAPIGSIK HAHGVFLFLG RHFGKDYEEY VKKHGSDELF 240
  241 GSSLLFKKIV KYTCGLFDTL EEFCSDITLL FIGTANENWN QTRIPVYLAH TPAGSSSNVM 300
  301 AHLDQMFSYG GVPTFDMGEE KNLKAYGQKL PPQYNFTGIA DVPIYLFWSD DDWLSTKQDL 360
  361 EETLFAQLNS QVVQGSFRIE NYNHLHFIWG TNAASQVYNV ITGIILQDDN T

Type	Start	End	Confidence
Signal Peptide	1	27	0.62
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	411	0.97