YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	bli-2
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDEKELNHEA SMLRKVAFLG ICISTVSTLT CIIAIPLLYN YMQHVQTNLH SEIDFCRHRT  60
   61 VGLFIQYERM QSASGIKGRR IIVKKQAGYD FAESNTNAES GFSSSKSSLA PGGQCCSCKT 120
  121 GPSGPPGPPG EDGRDGRDGK PGLNGEDGTD AKDSAPRRDA AAPCYDCPVG PPGPPGNIGS 180
  181 KGQPGRNGKD GLPGVPGLPG QPGEPGDDGE PGEDGDPGQP GDNGEPGKCD EVNVAQGPPG 240
  241 SPGPPGLPGP DGLPGTPGNP GQDGEQGPAG EPGRDGKDGQ PGRPGQPGPP GEPGTGGGCE 300
  301 HCPTPRTAPG Y

Type	Start	End	Confidence
Cytoplasmic	1	15	0.96
Transmembrane Helix	16	39	0.92
Non-Cytoplasmic	40	311	0.98