YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE11322
Protein type:	Globular with Signal Peptide
Type Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLRALFSSI LFSFKTYFSK KIDSVFQMSS SELIAELERE RDRRVLSIQS HVVHGYAGNK  60
   61 CSVFPLQLHG FEVDFINSVQ FSNHAGNIEY LTLPTRYEHV KGQKLTEKEL EELYEGLTLN 120
  121 NINNYTHVLT GYCGNVTFLQ KIADVVKDLK KKNGNTTFVC DPVMGDNGRY YTPKELMPVY 180
  181 RDLIIPLADV LTPNAFELGE LTGSPIETEE DCLRAVNELH AKGVKTVVVT SGVTGAQTNE 240
  241 SLRCYASVKG SHVYRFTFPR LVGQFVGTGD TFTSLLVVWL DELNGDVSEA VKRVLASMQC 300
  301 LIRKTSSYAQ LQVDTNSRAM CELRLIQSRK DLLWPPTCDQ IQVEKIGQ

Type	Start	End	Confidence
Signal Peptide	1	19	0.51
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	348	0.99