YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	dad-1
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAQVVPVLS KLFDDYQKTT SSKLKIIDAY MTYILFTGIF QFIYCLLVGT FPFNSFLSGF  60
   61 ISTVTSFVLA SCLRMQVNQE NRSEFTAVST ERAFADFIFA NLILHLVVVN FLG

Type	Start	End	Confidence
Cytoplasmic	1	28	0.96
Transmembrane Helix	29	48	0.92
Non-Cytoplasmic	49	55	0.65
Transmembrane Helix	56	77	0.84
Cytoplasmic	78	92	0.86
Transmembrane Helix	93	112	0.76
Non-Cytoplasmic	113	113	0.83