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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE11200
Protein type: Globular with Signal Peptide
Type Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDCNWTNPL VTVSNTAALL ASGYALWSCA SKKNKKDINS ETKTLDKRPQ TAELVKDEKN  60
   61 SNSEEKKTAS ANEVPAQKKL NSKEEVKKEK KKSEDDLLDV KKTVSKEDDK KKVDKKDGSK 120
  121 KLSKKKLKEE KKEKSKKVNK EKKISKTESD DEDNEQPPEP GSDPRKIWAF KAAKMKCQAI 180
  181 SKLHQDKIKG YMPPNCTYTA YEANPDLNRY ADVRCIEETR VVLKNHDRDY IHASWMRMPG 240
  241 KDQSTYITTQ GPLPETLSDF WHMIYQEKIA YVLMLCTLFE GGVEKCALYY PEKLGEVVKF 300
  301 GKYEITLTEC KEEAIAGTIL NSLTVINTED ATSEPLYMNH VQVPWWPDQL APEDARPMIE 360
  361 LYKWVKKVNP KEKPICVHCS AGVGRTATFV GIDYATIRIM ENPNIEMLDI VREMRAMRFQ 420
  421 AVQSHMQFLF LYVVLMEYFI GEGVVERTGQ IDTFMTQYKK HAQKKLAKQY LQRKQKVVVK 480
  481 DAFPFNGSFQ IIFFEPPPIE RGGGLGTDKR IFLGHIFV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle