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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE11095
Protein type: Transmembrane
Type Confidence: 0.78
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGPGSGNIV HTLLLVAGIV LTAGVLGVVI AILVNENNTN TNTNTIYNGT NTYNSTIQYN  60
   61 STYVYNSTII EIDIASKVLN VAQPAKVSPG TDKYNSYQQV VQLFKASVNL SVDPCNDFYA 120
  121 YTCGNFKGDM SFDISDNSNT NDMVTRLTND TYISTAPLPV QQTRWYFDTC VNARQNWNTI 180
  181 ADGSVVTAAI NQLAAGNPGK HENSTKFPFP MLDQKTDVTT FPDRFGLGYL TGSLTAQGVD 240
  241 TIISAGVDTN WKDPAGPEGF AYLIDQPTTF APNTYYLKDF DALNASLTYQ ITENMLQLAK 300
  301 VQNKTLDANI LAKDVQDIIK LDYLLATKFS TDDTTRRQYD RSYNPNTLPQ LLTQYHKDVF 360
  361 SWHMFLPIAV GTAEHVLDKL LDQGSGYNYY ITMEPTKLNM LLTSLNKDNT LGITPRALVN 420
  421 YFYYRLVDSL SEFLPAPPAG NMIRPFVKIE RQPVGRPRHV LPEDRKYERK LIEDLTEAQY 480
  481 SCAQETIDIQ YANARLFIDQ IYPTATDRKN VREHVAKVAS SIVIGFRSMI DQLNWMTPST 540
  541 KKGAYNKIEN LVKNIAYPDW ITDDAQLTAY HAPMNFTKTD TYVDMFFNVQ NFNLYSQWDQ 600
  601 LVQGPADRTG FNGPPGITNA WYQPELNSIT FPAGILKKPF YDFNWPASVN FGAMGVIAGH 660
  661 ELTHGFDDQG VQWNGVGTLS GWMDATSKVS FTNMAQCVVN EYSGFCPLDK ATYGSAACID 720
  721 GAQTQGENIA DNGGIHSAFR AYKNYVDLYG PDPVLPDPQL QYFNPDQLFF LSFAQVWCQM 780
  781 PYTDAQFLRQ ILVDVHSPSI YRVLGTIQNF PAFKTAFNCP SSTYAPDNHC NVWVSDIDTT 840
  841 FGLPNVKTDI NVVPEAPITS TNVDKMNAYQ MAVDYYAKSV NTAIDPCDDF YSYACGNFNQ 900
  901 SVSFYTARAQ NLVYMAQKLE DPTYQTTINS SPALKKEKQL YNACLTATAS SQSEDQILIS 960
  961 KNYIQTKVDD LKTLIGQDFT LVNGGAPKLP SAKQIGDALG YLSFEQGIDT LISPLVDTYW1020
 1021 IDNSKGYQMF IDQNTAYLSK TYYQPAAWKI EKPKYLKMAL DVVTRYAREQ NITLPAGASD1080
 1081 LLSNVLDYEQ NIAVKYSTDD NTRRQFQRSW NLTKTSDLVT KYNFMDWMTY LSHAPNAVKA1140
 1141 KITDANYQVS VMEVDRLTHF SADYLQQSPE LLVNLLFVRL LLGNAQYIPS YASAFRGMTD1200
 1201 ESIFLGLSRR KTIPNHIPPP NFDLEANGPA CASVANNLMQ FANGRVFVDY MYPTAQDVTN1260
 1261 IRKSAGGIIK NVISSFQGMI DQLDWMAPDT KQKAYAKTVQ IQQNIAFPDW IKNDTLLGNY1320
 1321 YSTLVIADSD NFYDIYDKLI KFNIFVQYNQ LNAAQTDRTD FLGQPGTVNA WYQPELNSIT1380
 1381 FPAGILVPPY FNPNWPPSIN YGGMGLVAGH ELTHGFDDQG VQWGPTGNLA RWMDDNSMAG1440
 1441 FKNMSQCVIN EYSGFCPLNA TNYSPNCVKG PQTQGENIAD NGGVHAAFNA YKTHQSLDGP1500
 1501 DPRLPDRLFG QFTHDQLFFM SFAQVWCEVR RTDDALYTQI MVDPHSPSMY RVYGTIQNFP1560
 1561 AFQTAFNCPL GSKSAPEQHC EVWVPGKYQ

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