YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	dpy-17
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVFAGYAAC TLGAVSMLLC VSLVPQVYQQ VSMLRDELTT EMEAWRLESD QIYMDMQKFG  60
   61 RVRRQAGGYG GYGGYGSGPS GPSGPSGPHG GFPGGPQGHF PGNTGSSNTP TLPGVIGVPP 120
  121 SVTGHPGGSP INPDGSPSAG PGDKCNCNTE NSCPAGPAGP KGTPGHDGPD GIPGVPGVDG 180
  181 EDADDAKAQT QQYDGCFTCP AGPQGPPGSQ GKPGARGMRG ARGQAAMPGR DGSPGMPGSL 240
  241 GPIGPPGAAG EEGPTGEPGA DVEHQIGLPG AKGTPGAPGE SGDQGEQGDR GATGIAGPPG 300
  301 ERGPQGEKGD DGPNGAAGSP GEEGEPGQDA QYCPCPQRNT NAAVSGNQGY RN

Type	Start	End	Confidence
Signal Peptide	1	29	0.94
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	352	0.99