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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: alh-7
Protein type: Transmembrane
Type Confidence: 0.75
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRLSQFKRS YSLLPQGAQA YIGGKWTASE TGNSFDVLNP FNNEVVDRAT NCTVKDAEKA  60
   61 VHSALEGFDK WAHTYSAKQR GAILHKWFEI LVQRETELAT LLTKEQGKPL AEARGEIQYS 120
  121 AAYFDWYAGE ARRVYGQVVP SAVVNRLHLH TREPIGVVAL IAPWNFPTAM IARKAAAALS 180
  181 VGCSAVVKPS GDTPLSALAL AQTAEEAGIP AGVFNVITAD HSNTAEISKY LCESTDVSAI 240
  241 SFTGSTPVGK LLLAQSASTV KRVCLELGGN APLIVFDDAD LDVAVNGTMA TKFRCSGQTC 300
  301 VSANRIYVHE KIHDQYISKL AAAMKEKLVL GDGLNPKTTQ GPLVNQKAVD KCELLLSDAL 360
  361 GKGSELICGG KRGEHGTSYE PTLITNVQSN TNIAHTEIFG PIASVQKFRD EQEVLEAANN 420
  421 CRVGLAGYVF GRDQSRLQRV ARKLEVGMVG VNEGLISCAE AAFGGVKESG IGREGGAQGI 480
  481 DEFTNWNCRV AAIPCIYHLP IFFFFHCNFF LTRDEEKWFL GHGRRADKFQ RPFILLCCFP 540
  541 PVFFCFSQLF PMLKRFPSKK IMYSVGKQR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle