YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE10482
Protein type:	Transmembrane
Type Confidence:	0.60
Topology Confidence:	0.24
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVITNLRNV WNSHFMFLLI AVYTLSSNLN CFWYKKSFFK YENTLRIETS TGLVLFPKIA  60
   61 QSLGLCLAEN KVKPGLLAEG TTGQIANEIS SLLMDNGIKS FEAREITNNS LTNSYDKILS 120
  121 TDLVKELADT VALFTRLKQH GTKIAVCTAD NRKSSLLALK RMNVDHLVDM IVCGDDKNTA 180
  181 PKPSPHNAIK ICKHLGVDQS KAIMVGDTRV DMEMAHNAEL GAAVGVLSGI GCKDHLHRAD 240
  241 VLLEHIGHLV NTFYENR

Type	Start	End	Confidence
Cytoplasmic	1	9	0.24
Transmembrane Helix	10	32	0.50
Non-Cytoplasmic	33	257	0.65