YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7500762
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFQKSTIVMI FALFCISSCQ VLYTPEVVSS PYYYASSPVA SAYPYAYAYG AAAYPTAYYG  60
   61 WGSNKGQQAP SSAPTQKLTN NQGFTVEFPT KNGVALHISV RMGSYGQNVI VFNHLQRGRW 120
  121 HREEHHQNTI MFGRPFCMRI HNEHRKYSIH VDGHHIGHYH HHKCPKRIVA MTVRGDLRVG 180
  181 KIHFENFKHH NGGGTEIGVM QMPVAPTPIV VAQPPPPMIV PQPQIVPVVQ QIMQPMVQPI 240
  241 YPSVQPIVYP TATPIIYTQP EVIYMDGYHH HRHHHY

Type	Start	End	Confidence
Signal Peptide	1	19	0.96
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	276	0.98