YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE09946
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLSLLTPRL VTKNTIARIV LVRNASSGLT LKHEQTIKIN DQQGFFKYQR DVSRDTRYSN  60
   61 PAKPGDTAAR FMFRKLGHAY EIYPLFGLLA IWCVLFGYTV WYSFEKAEIW LDRSHTVAPW 120
  121 DWERIRNNYW KKPTLVFDPT GVTHQRLEIL ETLQDEMVAA AKERGTR

Type	Start	End	Confidence
Cytoplasmic	1	79	0.86
Transmembrane Helix	80	102	0.90
Non-Cytoplasmic	103	167	0.87