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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE09935
Protein type: Transmembrane
Type Confidence: 0.79
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPQDPVYSQ NDPLLVGNSN RSQSSDPWKT IAKIATVVIG ILFVTSPIVF GVSGVAEKNK  60
   61 ESKHGSLANQ TSANNATEEN TPKNYSTSFT ETKKSIILNQ KTDGTVTEYA TFEYNVTSDE 120
  121 YSRLNNDGTK IQPWLVKNME RKVKFYYFKG FPVRKTEFIH KIKPNEDGLN CSDIPKDDEL 180
  181 MILNPKFKTF FIGIYWNINM HDDKKQLIHL KIEILQMQEL VNHGGLAEFC PNSLENCMDI 240
  241 PSNGSLQFEK PPFDKFFIGI KMLNNMTTNH TNLPKIDDMG SFNASGHWKL LRRYEEFDTQ 300
  301 RQPIQLIPES GKNYIKFTYD VINNVYSHNN ADGSDVSPRE LQYIERIVHE GNNEAFIQPD 360
  361 YPEEVNGGHI HWMFRLKNNG KSVKKVVIKM AGVDDILKEN AGIIEACSNY YIVILSDNIR 420
  421 LFKTDVNDRK TVETFLIEVY WRESILSKAI LHRKTCKLKT CSEDTPETST ATTTVSEMSA 480
  481 TPRSIGTTTP SNDTESHQDV VSTQLLTWRQ QHIALGPISR ENHVKFTYDV MRDMYSHTKP 540
  541 NGSSYVPYNV ENIERVVDKR LNQVYLHRND LTKYTYISWV FDMTIDGKVV VKLTIKVSGM 600
  601 EKRASRGKLE ICRIYGYEKC TAIPIDEGFT IEYPQFSVFK IEYYYNALSD PKNNPDTILF 660
  661 KTKLKEGLNV ESLSVEVNWK PKGPLANQTT LST

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle